Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFRAP16234 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PDGFRAP16234 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AL360271.1-201ENST00000395679 510 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AL139805.1-201ENST00000407837 289 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 RANP7-201ENST00000418085 644 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AC079922.1-201ENST00000443291 359 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 GAPDHP23-201ENST00000444823 993 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AC093166.3-201ENST00000448785 303 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFRAP16234 RPL34P33-201ENST00000486062 334 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 SNX18P24-201ENST00000505249 671 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AC095052.1-201ENST00000509955 863 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFRAP16234 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
PDGFRAP16234 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 MAPK10-261ENST00000641050 3109 ntBASIC6.5□□□□□ -1.37
PDGFRAP16234 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFRAP16234 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFRAP16234 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PDGFRAP16234 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFRAP16234 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.49□□□□□ -1.37
PDGFRAP16234 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PDGFRAP16234 RN7SKP144-201ENST00000411108 279 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AL035422.1-201ENST00000414193 397 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AC092865.3-201ENST00000425390 1026 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AKR1B10P1-201ENST00000425765 942 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFRAP16234 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFRAP16234 RN7SL170P-201ENST00000487098 295 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AC011853.1-201ENST00000518911 454 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFRAP16234 MIR4502-201ENST00000580432 81 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AL352984.2-201ENST00000611153 546 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AC073592.6-201ENST00000624271 415 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 AC138627.1-204ENST00000641894 765 ntBASIC6.49□□□□□ -1.37
PDGFRAP16234 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFRAP16234 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFRAP16234 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFRAP16234 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PDGFRAP16234 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AL359091.1-201ENST00000449048 1734 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AC012078.1-201ENST00000405035 1646 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 VN1R12P-201ENST00000403778 876 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms