Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC021146.10-201ENST00000515628 706 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
TOP2AP11388 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC10.3□□□□□ -0.76
TOP2AP11388 AC096996.1-201ENST00000563813 325 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 AC008115.4-201ENST00000619780 775 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
TOP2AP11388 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.3□□□□□ -0.76
TOP2AP11388 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
TOP2AP11388 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 AC119674.1-213ENST00000641177 1386 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 GTF2IP4-201ENST00000453092 2054 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC10.29□□□□□ -0.76
TOP2AP11388 AL133243.4-201ENST00000623116 3109 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC10.29□□□□□ -0.76
TOP2AP11388 SNORA74A-201ENST00000364089 198 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 AP000534.2-201ENST00000412729 568 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 NENFP1-201ENST00000419476 466 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC10.29□□□□□ -0.76
TOP2AP11388 AC004815.1-201ENST00000484185 331 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC10.29□□□□□ -0.76
TOP2AP11388 OR10G5P-201ENST00000532733 358 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC10.29□□□□□ -0.76
TOP2AP11388 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC10.29□□□□□ -0.76
TOP2AP11388 SUGT1P3-202ENST00000604259 383 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 AL359513.1-201ENST00000614364 557 ntBASIC10.29□□□□□ -0.76
TOP2AP11388 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
TOP2AP11388 ATM-215ENST00000530958 5718 ntTSL 2 BASIC10.29□□□□□ -0.76
TOP2AP11388 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TOP2AP11388 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC10.28□□□□□ -0.76
TOP2AP11388 AL161756.3-201ENST00000641216 2071 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TOP2AP11388 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 AL022319.1-201ENST00000458183 1167 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AC068522.1-201ENST00000482895 345 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 HIGD1AP14-201ENST00000507617 282 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 IGLV2-28-201ENST00000520681 304 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
TOP2AP11388 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TOP2AP11388 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 AC005840.5-201ENST00000619166 599 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 CASC19-264ENST00000641912 1184 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
TOP2AP11388 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
TOP2AP11388 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TOP2AP11388 AC011504.1-201ENST00000623331 4103 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TOP2AP11388 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TOP2AP11388 RNA5SP333-201ENST00000363466 118 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 RNA5SP334-201ENST00000364825 118 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 RPS26P41-201ENST00000450370 284 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AL162739.1-201ENST00000450606 307 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC10.28□□□□□ -0.76
TOP2AP11388 FKBP1AP1-201ENST00000594588 318 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AL512329.2-201ENST00000607350 548 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 AC136428.4-201ENST00000634254 1155 ntBASIC10.28□□□□□ -0.76
TOP2AP11388 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
TOP2AP11388 AC005618.1-201ENST00000606901 3148 ntBASIC10.27□□□□□ -0.76
TOP2AP11388 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TOP2AP11388 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
TOP2AP11388 AFP-201ENST00000226359 1914 ntTSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
TOP2AP11388 CASC19-248ENST00000641674 1356 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 AL133173.1-201ENST00000423458 397 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 VDAC2P4-201ENST00000452925 711 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC10.27□□□□□ -0.77
TOP2AP11388 RN7SL329P-201ENST00000467740 299 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms