Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC022164.1-201ENST00000568767 2673 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 SDC4P-201ENST00000453285 601 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC118758.1-202ENST00000454719 225 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AL845552.1-201ENST00000556820 323 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC092332.1-201ENST00000563684 829 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AL591926.1-201ENST00000620542 217 ntBASIC6.12□□□□□ -1.43
HLA-DQB2P05538 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DQB2P05538 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 HSPD1P9-201ENST00000420325 1636 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 TRIM60P16-201ENST00000444048 694 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 ACA64.4-201ENST00000459070 127 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 RPL12P7-201ENST00000493832 494 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 AC023310.2-201ENST00000553844 547 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 AC092266.1-201ENST00000610958 165 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 ZNF101P1-201ENST00000435701 1720 ntBASIC6.11□□□□□ -1.43
HLA-DQB2P05538 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DQB2P05538 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC104966.1-201ENST00000467010 1464 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL096711.1-201ENST00000404780 554 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 SNRPEP6-201ENST00000407465 277 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC007679.3-201ENST00000434035 414 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RBMY2AP-201ENST00000445405 1157 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL445466.1-201ENST00000448432 357 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RBMY2CP-201ENST00000448575 1157 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RBMY2DP-202ENST00000448881 1157 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RBMY2BP-202ENST00000451071 1156 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC104164.1-201ENST00000460282 590 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC122718.2-201ENST00000505325 591 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RN7SKP248-201ENST00000516278 305 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RNA5SP473-201ENST00000516402 125 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RN7SKP238-201ENST00000516483 249 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AP005119.1-201ENST00000580956 292 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AP003789.1-201ENST00000617737 605 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC069234.4-201ENST00000621276 412 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AC034229.2-201ENST00000566945 2508 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms