Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC004908.1-201ENST00000606572 541 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AL021368.1-201ENST00000607490 540 ntBASIC5.77□□□□□ -1.49
SSX4O60224 MIR6806-201ENST00000622141 64 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC089999.3-201ENST00000622440 577 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC006328.2-201ENST00000623198 397 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC104820.1-201ENST00000624183 307 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC012005.2-201ENST00000624333 397 ntBASIC5.77□□□□□ -1.49
SSX4O60224 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX4O60224 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX4O60224 UBBP1-201ENST00000392399 473 ntBASIC5.76□□□□□ -1.49
SSX4O60224 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 FAM204CP-201ENST00000424489 642 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 BTBD7P2-201ENST00000441962 620 ntBASIC5.76□□□□□ -1.49
SSX4O60224 GAPDHP37-201ENST00000442317 968 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 AC009963.4-201ENST00000448535 339 ntBASIC5.76□□□□□ -1.49
SSX4O60224 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 CCNJP2-201ENST00000457810 1163 ntBASIC5.76□□□□□ -1.49
SSX4O60224 OR7E22P-201ENST00000478335 1035 ntBASIC5.76□□□□□ -1.49
SSX4O60224 RPS27P20-201ENST00000492051 246 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 AC122718.2-201ENST00000505325 591 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 GUSBP9-201ENST00000510138 584 ntBASIC5.76□□□□□ -1.49
SSX4O60224 RN7SKP70-201ENST00000516655 271 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 SNRPCP6-201ENST00000528310 210 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 OR4A40P-201ENST00000533878 948 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC073916.1-201ENST00000545095 130 ntBASIC5.76□□□□□ -1.49
SSX4O60224 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 AC009268.1-201ENST00000561352 1203 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX4O60224 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.76□□□□□ -1.49
SSX4O60224 RPL29P33-201ENST00000587474 316 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC005229.3-201ENST00000603438 323 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AL590032.1-201ENST00000604920 252 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 AC012676.3-201ENST00000614983 479 ntBASIC5.76□□□□□ -1.49
SSX4O60224 uc_338.29-201ENST00000615099 168 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 AL683826.1-201ENST00000624104 627 ntBASIC5.76□□□□□ -1.49
SSX4O60224 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX4O60224 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 AC120036.2-201ENST00000509729 1474 ntBASIC5.76□□□□□ -1.49
SSX4O60224 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX4O60224 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX4O60224 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 ZNF806-201ENST00000438300 1774 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSX4O60224 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 RNU11-201ENST00000387069 134 ntBASIC5.75□□□□□ -1.49
SSX4O60224 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSX4O60224 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 CYCSP17-201ENST00000407870 315 ntBASIC5.75□□□□□ -1.49
SSX4O60224 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX4O60224 RPS10P21-201ENST00000430654 475 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AL645939.3-201ENST00000435408 225 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms