Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
O00370 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.58□□□□□ -1.36
O00370 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
O00370 RNA5SP279-201ENST00000365513 117 ntBASIC6.58□□□□□ -1.36
O00370 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
O00370 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.58□□□□□ -1.36
O00370 AC092865.3-201ENST00000425390 1026 ntBASIC6.58□□□□□ -1.36
O00370 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.58□□□□□ -1.36
O00370 RPSAP65-201ENST00000429660 595 ntBASIC6.58□□□□□ -1.36
O00370 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.58□□□□□ -1.36
O00370 RPL12P30-201ENST00000488389 499 ntBASIC6.58□□□□□ -1.36
O00370 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.58□□□□□ -1.36
O00370 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
O00370 RNA5SP434-201ENST00000516647 121 ntBASIC6.58□□□□□ -1.36
O00370 NPIPB14P-203ENST00000532298 987 ntBASIC6.58□□□□□ -1.36
O00370 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.58□□□□□ -1.36
O00370 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
O00370 AL139041.1-201ENST00000605480 610 ntBASIC6.58□□□□□ -1.36
O00370 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.58□□□□□ -1.36
O00370 AL359091.2-201ENST00000609303 556 ntBASIC6.58□□□□□ -1.36
O00370 AC016252.1-201ENST00000609721 474 ntBASIC6.58□□□□□ -1.36
O00370 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.58□□□□□ -1.36
O00370 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.58□□□□□ -1.36
O00370 AL109924.4-201ENST00000623089 670 ntBASIC6.58□□□□□ -1.36
O00370 AC003992.1-201ENST00000635364 557 ntBASIC6.58□□□□□ -1.36
O00370 OR4G1P-202ENST00000641173 1788 ntBASIC6.58□□□□□ -1.36
O00370 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
O00370 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
O00370 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.58□□□□□ -1.36
O00370 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
O00370 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
O00370 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.58□□□□□ -1.36
O00370 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
O00370 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
O00370 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 ZNF101P1-201ENST00000435701 1720 ntBASIC6.57□□□□□ -1.36
O00370 AC011416.1-201ENST00000514947 1732 ntBASIC6.57□□□□□ -1.36
O00370 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 RNA5SP110-201ENST00000362638 115 ntBASIC6.57□□□□□ -1.36
O00370 RPL23AP17-201ENST00000401064 499 ntBASIC6.57□□□□□ -1.36
O00370 AC108479.1-201ENST00000431142 427 ntBASIC6.57□□□□□ -1.36
O00370 AL354893.1-201ENST00000433735 348 ntBASIC6.57□□□□□ -1.36
O00370 BTG3P1-201ENST00000435859 716 ntBASIC6.57□□□□□ -1.36
O00370 CLNS1AP1-201ENST00000435954 682 ntBASIC6.57□□□□□ -1.36
O00370 TIMM8BP2-201ENST00000445940 251 ntBASIC6.57□□□□□ -1.36
O00370 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.57□□□□□ -1.36
O00370 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.57□□□□□ -1.36
O00370 OR6M2P-201ENST00000529831 871 ntBASIC6.57□□□□□ -1.36
O00370 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.57□□□□□ -1.36
O00370 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.57□□□□□ -1.36
O00370 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.57□□□□□ -1.36
O00370 AP001823.1-201ENST00000604056 1003 ntBASIC6.57□□□□□ -1.36
O00370 MIR6721-201ENST00000617181 87 ntBASIC6.57□□□□□ -1.36
O00370 AL137067.2-201ENST00000621202 131 ntBASIC6.57□□□□□ -1.36
O00370 AL357140.4-201ENST00000636827 412 ntBASIC6.57□□□□□ -1.36
O00370 AC120036.2-201ENST00000509729 1474 ntBASIC6.57□□□□□ -1.36
O00370 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
O00370 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
O00370 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 AC024651.2-201ENST00000562480 2098 ntBASIC6.57□□□□□ -1.36
O00370 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.57□□□□□ -1.36
O00370 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
O00370 OFD1P17-201ENST00000437639 3018 ntBASIC6.57□□□□□ -1.36
O00370 AL449283.1-201ENST00000602631 3403 ntBASIC6.57□□□□□ -1.36
O00370 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.57□□□□□ -1.36
O00370 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.57□□□□□ -1.36
O00370 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
O00370 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.56□□□□□ -1.36
O00370 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.56□□□□□ -1.36
O00370 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.56□□□□□ -1.36
O00370 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
O00370 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
O00370 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 RNA5SP232-201ENST00000364144 119 ntBASIC6.56□□□□□ -1.36
O00370 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 RNU11-201ENST00000387069 134 ntBASIC6.56□□□□□ -1.36
O00370 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
O00370 RBBP4P5-201ENST00000398583 1266 ntBASIC6.56□□□□□ -1.36
O00370 RN7SKP144-201ENST00000411108 279 ntBASIC6.56□□□□□ -1.36
O00370 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms