Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC090826.1-203ENST00000569235 490 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC011193.2-201ENST00000582638 367 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 MIR4660-201ENST00000583549 74 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AL589863.1-201ENST00000595383 631 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AL589765.5-201ENST00000596133 515 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC023206.1-201ENST00000605824 298 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AL133481.2-203ENST00000607558 139 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 OR51C1P-201ENST00000608504 942 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 MIR7159-201ENST00000620587 66 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AL121985.3-201ENST00000620690 523 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC103564.3-201ENST00000621194 220 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC022400.9-201ENST00000623633 273 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 HSPD1P1-201ENST00000503199 1726 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 OR9K1P-202ENST00000641111 3217 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 CDY11P-201ENST00000447168 1651 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP321-201ENST00000362722 111 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 SNORD16-201ENST00000362803 99 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RN7SKP145-201ENST00000363291 303 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC245036.1-201ENST00000391727 309 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RPL11P3-201ENST00000395256 523 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RN7SKP117-201ENST00000410175 264 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AL139184.1-202ENST00000422303 222 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AL157884.1-201ENST00000424561 454 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 FECHP1-201ENST00000431896 1214 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC009518.3-201ENST00000438972 253 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RPL29P7-201ENST00000440227 457 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 GAPDHP33-201ENST00000443168 1013 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 UBE2V2P4-201ENST00000447495 259 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 MED28P7-201ENST00000456611 530 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RPL12P24-201ENST00000474907 486 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP230-201ENST00000517039 122 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AL132640.1-201ENST00000559594 619 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 MIR6085-201ENST00000618314 110 ntBASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RBFOX3A6NFN3 AC010266.2-201ENST00000564741 3255 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PSMC1P4-201ENST00000515236 1327 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms