Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 AP002800.1-201ENST00000624982 2225 ntBASIC7.21□□□□□ -1.26
CCDC66A2RUB6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC66A2RUB6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC125232.1-201ENST00000452554 1408 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 RN7SKP55-201ENST00000364888 307 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL360271.1-201ENST00000395679 510 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ST13P16-201ENST00000401760 781 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 RPS26P38-201ENST00000414476 348 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 CLIC4P3-201ENST00000422221 752 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 CLNS1AP1-201ENST00000435954 682 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC099063.2-201ENST00000446360 662 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AP001803.1-201ENST00000525668 147 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AP001994.1-201ENST00000527539 826 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 HNRNPCP8-201ENST00000528764 888 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC007537.1-201ENST00000539347 327 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC092868.3-201ENST00000560515 784 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 FRG2IP-201ENST00000563581 781 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 EIF4A3P1-201ENST00000578499 647 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 RN7SL657P-201ENST00000582431 293 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 MTCO2P2-201ENST00000591258 225 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SIGLEC31P-201ENST00000594237 551 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL451064.1-201ENST00000607718 471 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC012640.3-201ENST00000607847 430 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC010333.3-201ENST00000615100 402 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 TCL6_3.1-201ENST00000619064 137 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC025287.2-201ENST00000621911 668 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 CU459211.1-201ENST00000635667 749 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AC093844.1-201ENST00000514910 1361 ntBASIC7.2□□□□□ -1.26
CCDC66A2RUB6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CCDC66A2RUB6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 HSPD1P14-201ENST00000432666 1618 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 RNU6-1331P-201ENST00000363658 106 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 SNORA70.5-201ENST00000365519 135 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 RNA5SP177-201ENST00000410122 107 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC116036.1-201ENST00000412199 367 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 FTLP17-201ENST00000432567 525 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 NIP7P1-201ENST00000433227 512 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AL353803.3-201ENST00000444641 335 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 snoU13.29-201ENST00000459370 104 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC083806.1-201ENST00000468934 316 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 RN7SL379P-201ENST00000479912 293 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms