Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.43■■□□□ 1.34
CYP46A1Q9Y6A2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.42■■□□□ 1.34
CYP46A1Q9Y6A2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 AC093484.2-201ENST00000580996 2166 ntBASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 AL390719.1-204ENST00000412397 1219 ntBASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 AC091874.3-201ENST00000512672 1195 ntBASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 AC018553.1-201ENST00000616682 1458 ntBASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CYP46A1Q9Y6A2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 AC005829.2-201ENST00000571422 1056 ntBASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.4■■□□□ 1.34
CYP46A1Q9Y6A2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CYP46A1Q9Y6A2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CYP46A1Q9Y6A2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CYP46A1Q9Y6A2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.39■■□□□ 1.34
CYP46A1Q9Y6A2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CYP46A1Q9Y6A2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CYP46A1Q9Y6A2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC073210.2-201ENST00000430369 194 ntBASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms