Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 AC233263.1-201ENST00000578059 224 ntBASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA4Q9Y5G9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 MIR1224-201ENST00000408193 85 ntBASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 FAM210CP-201ENST00000445714 574 ntBASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 SOX15-203ENST00000570788 1093 ntBASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 AC069544.1-201ENST00000609399 999 ntBASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA4Q9Y5G9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 AC211429.1-201ENST00000415277 523 ntBASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA4Q9Y5G9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms