Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 PGM5P4-201ENST00000421970 445 ntBASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MIR2861-201ENST00000636310 90 ntBASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HHLA3Q9XRX5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC004911.1-201ENST00000416316 871 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC069236.1-201ENST00000604339 616 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC080038.1-201ENST00000611274 1154 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 IKBKGP1-201ENST00000612193 1073 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC005332.8-201ENST00000622750 2735 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 AC068338.2-201ENST00000563278 1430 ntBASIC14.41□□□□□ -0.1
HHLA3Q9XRX5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 CNN2P6-201ENST00000439038 900 ntBASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 AL049812.1-201ENST00000432563 2267 ntBASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HHLA3Q9XRX5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms