Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 KRT16P5-201ENST00000455284 522 ntBASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 HTR7P1-201ENST00000538670 1336 ntBASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 AC079598.2-202ENST00000546624 1451 ntBASIC15.23■□□□□ 0.03
NOTCH3Q9UM47 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 REXO1L10P-201ENST00000615707 1290 ntBASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 RBM17P1-201ENST00000453646 1190 ntBASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 AC116562.2-201ENST00000507042 360 ntBASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 CYP2D8P-201ENST00000433633 1490 ntBASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH3Q9UM47 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 AC004264.1-201ENST00000608354 794 ntBASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NOTCH3Q9UM47 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 AL390719.1-204ENST00000412397 1219 ntBASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 AL024507.2-201ENST00000606070 2574 ntBASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 AC073508.3-201ENST00000619697 1419 ntBASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.21■□□□□ 0.02
NOTCH3Q9UM47 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NOTCH3Q9UM47 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms