Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 BX323043.1-201ENST00000641006 1765 ntBASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 LSM12P1-201ENST00000411836 588 ntBASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.97■□□□□ 0.63
LRTM1Q9HBL6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRTM1Q9HBL6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 AC133552.2-202ENST00000575694 574 ntBASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.95■□□□□ 0.62
LRTM1Q9HBL6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 AC080038.1-201ENST00000611274 1154 ntBASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms