Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 AC138932.1-201ENST00000534164 6830 ntBASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 AC023632.3-201ENST00000521633 145 ntBASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 OR10C1-204ENST00000622521 1039 ntBASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
POLR2J3Q9H1A7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 AL589743.5-201ENST00000616611 1050 ntBASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
POLR2J3Q9H1A7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 BID-214ENST00000617586 542 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLR2J3Q9H1A7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 AC007322.1-201ENST00000426983 750 ntBASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 AC004408.2-201ENST00000623613 2777 ntBASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2J3Q9H1A7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms