Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.86■□□□□ 0.77
CLPBQ9H078 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 AL031963.3-201ENST00000606441 850 ntBASIC19.86■□□□□ 0.77
CLPBQ9H078 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.86■□□□□ 0.77
CLPBQ9H078 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 BX119927.1-201ENST00000636596 1552 ntBASIC19.86■□□□□ 0.77
CLPBQ9H078 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 KRT8P20-201ENST00000423953 1409 ntBASIC19.85■□□□□ 0.77
CLPBQ9H078 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLPBQ9H078 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLPBQ9H078 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 HLA-G-202ENST00000376815 851 ntBASIC19.85■□□□□ 0.77
CLPBQ9H078 HLA-G-203ENST00000376818 1127 ntBASIC19.85■□□□□ 0.77
CLPBQ9H078 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 MTDHP1-201ENST00000605323 784 ntBASIC19.85■□□□□ 0.77
CLPBQ9H078 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CLPBQ9H078 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.85■□□□□ 0.77
CLPBQ9H078 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPBQ9H078 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPBQ9H078 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLPBQ9H078 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.84■□□□□ 0.77
CLPBQ9H078 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.84■□□□□ 0.77
CLPBQ9H078 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 PCDHAC2-203ENST00000615316 3011 ntBASIC19.84■□□□□ 0.77
CLPBQ9H078 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLPBQ9H078 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLPBQ9H078 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPBQ9H078 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.83■□□□□ 0.77
CLPBQ9H078 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.83■□□□□ 0.77
CLPBQ9H078 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLPBQ9H078 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLPBQ9H078 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.83■□□□□ 0.77
CLPBQ9H078 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CLPBQ9H078 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.83■□□□□ 0.77
CLPBQ9H078 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLPBQ9H078 AC023632.3-201ENST00000521633 145 ntBASIC19.83■□□□□ 0.77
CLPBQ9H078 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLPBQ9H078 Z99916.2-201ENST00000604037 246 ntBASIC19.83■□□□□ 0.77
CLPBQ9H078 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPBQ9H078 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPBQ9H078 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPBQ9H078 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPBQ9H078 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.83■□□□□ 0.76
CLPBQ9H078 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPBQ9H078 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPBQ9H078 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPBQ9H078 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLPBQ9H078 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms