Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 RPL31P11-201ENST00000426558 1558 ntBASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 AL445989.1-201ENST00000611641 1436 ntBASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.15□□□□□ -1.74
KRTAP4-4Q9BYR3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 KRTAP4-8-202ENST00000333822 1161 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 KRTAP4-11-201ENST00000391413 1180 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL133264.1-201ENST00000407157 562 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL117344.1-201ENST00000407196 616 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC009310.1-201ENST00000414414 451 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 BCAS2P2-201ENST00000425064 674 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL034428.1-201ENST00000425939 1101 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL353706.1-201ENST00000436728 494 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 Z77249.1-201ENST00000444622 1175 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL024493.1-201ENST00000449217 833 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL353637.1-201ENST00000451571 732 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 TMPRSS11CP-201ENST00000453277 683 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC074386.1-206ENST00000487102 761 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC092910.2-201ENST00000491262 348 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC147055.4-201ENST00000504399 745 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SCARNA15.1-201ENST00000516384 125 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 MTCYBP20-201ENST00000524239 1129 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SETP3-201ENST00000581726 813 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 BNIP3P38-201ENST00000601117 544 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC103881.1-201ENST00000603476 538 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 DUXAP3-201ENST00000603616 594 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AF250324.2-201ENST00000608299 610 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 U62317.3-201ENST00000608319 855 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC092954.2-201ENST00000609103 430 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC110285.6-201ENST00000617652 491 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 COA6-204ENST00000619305 697 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC112694.2-201ENST00000623697 768 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC026336.4-201ENST00000624565 1050 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms