Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE1Q99829 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CPNE1Q99829 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE1Q99829 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 RARRES2P6-201ENST00000567333 442 ntBASIC19.74■□□□□ 0.75
CPNE1Q99829 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.74■□□□□ 0.75
CPNE1Q99829 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CPNE1Q99829 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.74■□□□□ 0.75
CPNE1Q99829 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE1Q99829 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE1Q99829 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 KRT17P1-201ENST00000399211 1546 ntBASIC19.73■□□□□ 0.75
CPNE1Q99829 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.73■□□□□ 0.75
CPNE1Q99829 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE1Q99829 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE1Q99829 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE1Q99829 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE1Q99829 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CPNE1Q99829 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CPNE1Q99829 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE1Q99829 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CPNE1Q99829 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE1Q99829 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CPNE1Q99829 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CPNE1Q99829 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE1Q99829 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CPNE1Q99829 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.72■□□□□ 0.75
CPNE1Q99829 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.72■□□□□ 0.75
CPNE1Q99829 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE1Q99829 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE1Q99829 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE1Q99829 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 TNXA-203ENST00000507684 2038 ntBASIC19.71■□□□□ 0.75
CPNE1Q99829 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE1Q99829 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPNE1Q99829 AC093787.1-201ENST00000450396 207 ntBASIC19.71■□□□□ 0.75
CPNE1Q99829 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 AL020996.1-203ENST00000536896 2307 ntBASIC19.71■□□□□ 0.75
CPNE1Q99829 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPNE1Q99829 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE1Q99829 AL032819.2-201ENST00000624543 2162 ntBASIC19.71■□□□□ 0.75
CPNE1Q99829 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE1Q99829 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE1Q99829 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CPNE1Q99829 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPNE1Q99829 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms