Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.29■□□□□ 0.2
S1PR3Q99500 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.29■□□□□ 0.2
S1PR3Q99500 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.29■□□□□ 0.2
S1PR3Q99500 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.29■□□□□ 0.2
S1PR3Q99500 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.29■□□□□ 0.2
S1PR3Q99500 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 MKRN4P-201ENST00000444706 1521 ntBASIC16.29■□□□□ 0.2
S1PR3Q99500 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
S1PR3Q99500 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 PTBP1P-201ENST00000554374 1601 ntBASIC16.28■□□□□ 0.2
S1PR3Q99500 GPX1P1-201ENST00000388829 606 ntBASIC16.28■□□□□ 0.2
S1PR3Q99500 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.28■□□□□ 0.2
S1PR3Q99500 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.28■□□□□ 0.2
S1PR3Q99500 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 C2orf69P4-201ENST00000565394 541 ntBASIC16.28■□□□□ 0.2
S1PR3Q99500 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.28■□□□□ 0.2
S1PR3Q99500 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.28■□□□□ 0.2
S1PR3Q99500 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
S1PR3Q99500 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.28■□□□□ 0.2
S1PR3Q99500 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.28■□□□□ 0.2
S1PR3Q99500 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.28■□□□□ 0.2
S1PR3Q99500 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
S1PR3Q99500 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S1PR3Q99500 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
S1PR3Q99500 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
S1PR3Q99500 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
S1PR3Q99500 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.27■□□□□ 0.2
S1PR3Q99500 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.27■□□□□ 0.2
S1PR3Q99500 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.27■□□□□ 0.2
S1PR3Q99500 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S1PR3Q99500 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.27■□□□□ 0.19
S1PR3Q99500 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.27■□□□□ 0.19
S1PR3Q99500 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.27■□□□□ 0.19
S1PR3Q99500 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S1PR3Q99500 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S1PR3Q99500 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S1PR3Q99500 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S1PR3Q99500 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.26■□□□□ 0.19
S1PR3Q99500 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
S1PR3Q99500 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
S1PR3Q99500 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.26■□□□□ 0.19
S1PR3Q99500 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
S1PR3Q99500 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S1PR3Q99500 SLC29A4P1-201ENST00000398760 971 ntBASIC16.26■□□□□ 0.19
S1PR3Q99500 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.26■□□□□ 0.19
S1PR3Q99500 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.26■□□□□ 0.19
S1PR3Q99500 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.26■□□□□ 0.19
S1PR3Q99500 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms