Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 AC099778.1-201ENST00000568593 1911 ntBASIC17.51■□□□□ 0.39
APH1AQ96BI3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 KRASP1-201ENST00000407852 552 ntBASIC17.5■□□□□ 0.39
APH1AQ96BI3 GCSHP5-201ENST00000443090 522 ntBASIC17.5■□□□□ 0.39
APH1AQ96BI3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 AL359736.2-201ENST00000621992 437 ntBASIC17.5■□□□□ 0.39
APH1AQ96BI3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APH1AQ96BI3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.5■□□□□ 0.39
APH1AQ96BI3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.49■□□□□ 0.39
APH1AQ96BI3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.49■□□□□ 0.39
APH1AQ96BI3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APH1AQ96BI3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AC124016.1-201ENST00000609552 612 ntBASIC17.48■□□□□ 0.39
APH1AQ96BI3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 AP001271.2-201ENST00000624018 1556 ntBASIC17.48■□□□□ 0.39
APH1AQ96BI3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APH1AQ96BI3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
APH1AQ96BI3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 AP006587.1-201ENST00000534129 1502 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms