Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC073912.3-201ENST00000624414 853 ntBASIC25.82■■□□□ 1.72
RTF1Q92541 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTF1Q92541 FEM1AP1-201ENST00000431297 1995 ntBASIC25.82■■□□□ 1.72
RTF1Q92541 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTF1Q92541 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.82■■□□□ 1.72
RTF1Q92541 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.81■■□□□ 1.72
RTF1Q92541 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.81■■□□□ 1.72
RTF1Q92541 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.81■■□□□ 1.72
RTF1Q92541 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 AL512408.1-201ENST00000569378 2000 ntBASIC25.81■■□□□ 1.72
RTF1Q92541 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTF1Q92541 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.81■■□□□ 1.72
RTF1Q92541 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.8■■□□□ 1.72
RTF1Q92541 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.8■■□□□ 1.72
RTF1Q92541 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.8■■□□□ 1.72
RTF1Q92541 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.8■■□□□ 1.72
RTF1Q92541 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
RTF1Q92541 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
RTF1Q92541 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.8■■□□□ 1.72
RTF1Q92541 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 AP003071.4-201ENST00000562276 1284 ntBASIC25.8■■□□□ 1.72
RTF1Q92541 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
RTF1Q92541 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTF1Q92541 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.8■■□□□ 1.72
RTF1Q92541 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
RTF1Q92541 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
RTF1Q92541 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.8■■□□□ 1.72
RTF1Q92541 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTF1Q92541 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTF1Q92541 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 NIFKP9-201ENST00000419265 221 ntBASIC25.79■■□□□ 1.72
RTF1Q92541 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 BX088651.1-201ENST00000540551 451 ntBASIC25.79■■□□□ 1.72
RTF1Q92541 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.79■■□□□ 1.72
RTF1Q92541 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.79■■□□□ 1.72
RTF1Q92541 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
RTF1Q92541 REXO1L12P-201ENST00000622156 912 ntBASIC25.79■■□□□ 1.72
RTF1Q92541 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
RTF1Q92541 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.79■■□□□ 1.72
RTF1Q92541 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.79■■□□□ 1.72
RTF1Q92541 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTF1Q92541 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.79■■□□□ 1.72
RTF1Q92541 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
RTF1Q92541 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTF1Q92541 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.78■■□□□ 1.72
RTF1Q92541 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RTF1Q92541 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.78■■□□□ 1.72
RTF1Q92541 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.78■■□□□ 1.72
RTF1Q92541 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.78■■□□□ 1.72
RTF1Q92541 TUBB8P6-201ENST00000436895 1288 ntBASIC25.78■■□□□ 1.72
RTF1Q92541 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.78■■□□□ 1.72
RTF1Q92541 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.78■■□□□ 1.72
RTF1Q92541 KRT18P16-201ENST00000510337 1294 ntBASIC25.78■■□□□ 1.72
RTF1Q92541 AL355075.4-201ENST00000554988 638 ntBASIC25.78■■□□□ 1.72
RTF1Q92541 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.78■■□□□ 1.72
RTF1Q92541 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.78■■□□□ 1.72
RTF1Q92541 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTF1Q92541 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.78■■□□□ 1.72
RTF1Q92541 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTF1Q92541 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTF1Q92541 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTF1Q92541 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
RTF1Q92541 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.77■■□□□ 1.72
RTF1Q92541 KSR1P1-201ENST00000446298 240 ntBASIC25.77■■□□□ 1.72
RTF1Q92541 TSPY15P-201ENST00000457163 923 ntBASIC25.77■■□□□ 1.72
RTF1Q92541 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
RTF1Q92541 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.77■■□□□ 1.72
RTF1Q92541 C1QL1P1-201ENST00000568105 661 ntBASIC25.77■■□□□ 1.72
RTF1Q92541 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.77■■□□□ 1.72
RTF1Q92541 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTF1Q92541 GABARAPL3-202ENST00000624044 1851 ntBASIC25.77■■□□□ 1.72
RTF1Q92541 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.72
RTF1Q92541 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.72
RTF1Q92541 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.76■■□□□ 1.71
RTF1Q92541 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms