Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 AC231657.2-201ENST00000624556 255 ntBASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 TNXA-203ENST00000507684 2038 ntBASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 AC004408.2-201ENST00000623613 2777 ntBASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATG4AQ8WYN0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 AC004911.1-201ENST00000416316 871 ntBASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 C2orf69P4-201ENST00000565394 541 ntBASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 AL589743.5-201ENST00000616611 1050 ntBASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATG4AQ8WYN0 PHGDH-210ENST00000641115 1638 ntBASIC20.45■□□□□ 0.87
ATG4AQ8WYN0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 HLA-G-202ENST00000376815 851 ntBASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 HLA-G-203ENST00000376818 1127 ntBASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 AL032819.2-201ENST00000624543 2162 ntBASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
ATG4AQ8WYN0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 OR10C1-204ENST00000622521 1039 ntBASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATG4AQ8WYN0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
ATG4AQ8WYN0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATG4AQ8WYN0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
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