Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNIH3Q8TBE1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 FAM21FP-204ENST00000608637 956 ntBASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CNIH3Q8TBE1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNIH3Q8TBE1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNIH3Q8TBE1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CNIH3Q8TBE1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNIH3Q8TBE1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNIH3Q8TBE1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 AC007322.3-201ENST00000426526 701 ntBASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 AC079140.4-201ENST00000507448 529 ntBASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 AL136162.1-201ENST00000607711 1078 ntBASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 AC131212.1-201ENST00000613771 668 ntBASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
CNIH3Q8TBE1 LTB4R2-202ENST00000528054 3092 ntBASIC18■□□□□ 0.47
CNIH3Q8TBE1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 AC091799.1-201ENST00000422823 811 ntBASIC18■□□□□ 0.47
CNIH3Q8TBE1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18■□□□□ 0.47
CNIH3Q8TBE1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNIH3Q8TBE1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms