Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPEB3Q8NE35 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPEB3Q8NE35 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPEB3Q8NE35 AC124283.5-201ENST00000624661 1809 ntBASIC17.28■□□□□ 0.36
CPEB3Q8NE35 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 UNC93B4-201ENST00000505679 747 ntBASIC17.28■□□□□ 0.36
CPEB3Q8NE35 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 PHGDH-210ENST00000641115 1638 ntBASIC17.28■□□□□ 0.36
CPEB3Q8NE35 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
CPEB3Q8NE35 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 RPS2P52-201ENST00000469610 820 ntBASIC17.27■□□□□ 0.36
CPEB3Q8NE35 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 CD99P1-205ENST00000527459 561 ntBASIC17.27■□□□□ 0.36
CPEB3Q8NE35 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.27■□□□□ 0.36
CPEB3Q8NE35 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPEB3Q8NE35 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPEB3Q8NE35 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPEB3Q8NE35 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPEB3Q8NE35 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPEB3Q8NE35 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 AC008687.6-201ENST00000596318 630 ntBASIC17.26■□□□□ 0.35
CPEB3Q8NE35 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 AC008403.3-201ENST00000598924 454 ntBASIC17.26■□□□□ 0.35
CPEB3Q8NE35 AC120498.8-201ENST00000614275 531 ntBASIC17.26■□□□□ 0.35
CPEB3Q8NE35 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.26■□□□□ 0.35
CPEB3Q8NE35 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
CPEB3Q8NE35 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms