Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 AP000550.4-202ENST00000639755 178 ntBASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 KRT8P17-201ENST00000453110 1448 ntBASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CFAP43Q8NDM7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 YBX1P10-201ENST00000444752 975 ntBASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFAP43Q8NDM7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 HLA-G-202ENST00000376815 851 ntBASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 HLA-G-203ENST00000376818 1127 ntBASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 SAPCD2P2-201ENST00000431719 1174 ntBASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 AL031985.4-201ENST00000642138 673 ntBASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFAP43Q8NDM7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CFAP43Q8NDM7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 BX119927.1-201ENST00000636596 1552 ntBASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 EGLN1P1-201ENST00000531623 762 ntBASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 FAM87A-204ENST00000613235 858 ntBASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC31.03■■■□□ 2.56
CFAP43Q8NDM7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 DBP-204ENST00000599385 709 ntTSL 3 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.02■■■□□ 2.56
CFAP43Q8NDM7 COPE-203ENST00000351079 907 ntTSL 2 BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 AC128688.1-201ENST00000487626 519 ntBASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 ABBA01031674.1-201ENST00000635145 728 ntBASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC31.01■■■□□ 2.55
CFAP43Q8NDM7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
CFAP43Q8NDM7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31■■■□□ 2.55
CFAP43Q8NDM7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CFAP43Q8NDM7 AC116351.2-201ENST00000606540 1585 ntBASIC31■■■□□ 2.55
CFAP43Q8NDM7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 FSCN1P1-201ENST00000568912 1481 ntBASIC31■■■□□ 2.55
CFAP43Q8NDM7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 B3GAT3P1-201ENST00000471720 806 ntBASIC31■■■□□ 2.55
CFAP43Q8NDM7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC31■■■□□ 2.55
CFAP43Q8NDM7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC31■■■□□ 2.55
CFAP43Q8NDM7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.99■■■□□ 2.55
CFAP43Q8NDM7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CFAP43Q8NDM7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFAP43Q8NDM7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.99■■■□□ 2.55
CFAP43Q8NDM7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CFAP43Q8NDM7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms