Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.17■■□□□ 1.62
LINC00116Q8NCU8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LINC00116Q8NCU8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 FAM207BP-201ENST00000447172 505 ntBASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 FAM86EP-206ENST00000510506 987 ntBASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 AC011558.1-201ENST00000623459 338 ntBASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.16■■□□□ 1.62
LINC00116Q8NCU8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC092338.2-201ENST00000568827 1415 ntBASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 SLC25A1P2-201ENST00000430693 912 ntBASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 CCR12P-201ENST00000446203 998 ntBASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC141257.4-201ENST00000634557 245 ntBASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC136944.6-201ENST00000634818 245 ntBASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
LINC00116Q8NCU8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.14■■□□□ 1.62
LINC00116Q8NCU8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.14■■□□□ 1.61
LINC00116Q8NCU8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 PCED1CP-201ENST00000419887 785 ntBASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 AC092647.4-201ENST00000457211 535 ntBASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 AL023803.3-201ENST00000615559 522 ntBASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 AC010653.2-201ENST00000623505 997 ntBASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 FP700111.2-201ENST00000619190 1892 ntBASIC25.13■■□□□ 1.61
LINC00116Q8NCU8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 KRT18P48-201ENST00000434763 852 ntBASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 DUSP5P1-201ENST00000441325 1139 ntBASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 KRT16P6-202ENST00000425692 1426 ntBASIC25.12■■□□□ 1.61
LINC00116Q8NCU8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.11■■□□□ 1.61
LINC00116Q8NCU8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.11■■□□□ 1.61
LINC00116Q8NCU8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms