Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 AC012306.2-201ENST00000609350 630 ntBASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 CR392000.1-201ENST00000624770 1228 ntBASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 AC073314.1-201ENST00000568729 2216 ntBASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A9Q8NBW4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 KSR1P1-201ENST00000446298 240 ntBASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC38A9Q8NBW4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC38A9Q8NBW4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC38A9Q8NBW4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC38A9Q8NBW4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SLC38A9Q8NBW4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 RBM17P1-201ENST00000453646 1190 ntBASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 AC079598.2-202ENST00000546624 1451 ntBASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC38A9Q8NBW4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 C1QL1P1-201ENST00000568105 661 ntBASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 AC097493.4-201ENST00000641197 219 ntBASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 BX119927.1-201ENST00000636596 1552 ntBASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SLC38A9Q8NBW4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC38A9Q8NBW4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
SLC38A9Q8NBW4 MMP23A-201ENST00000234610 1017 ntBASIC18.62■□□□□ 0.57
SLC38A9Q8NBW4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC38A9Q8NBW4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC38A9Q8NBW4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms