Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.29■□□□□ 0.68
RIF1Q5UIP0 AC004980.1-204ENST00000429707 299 ntBASIC19.29■□□□□ 0.68
RIF1Q5UIP0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 KRT18P58-201ENST00000527480 1120 ntBASIC19.28■□□□□ 0.68
RIF1Q5UIP0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 TSPY19P-201ENST00000418461 509 ntBASIC19.28■□□□□ 0.68
RIF1Q5UIP0 TSPY18P-201ENST00000441642 509 ntBASIC19.28■□□□□ 0.68
RIF1Q5UIP0 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
RIF1Q5UIP0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 AC092865.5-201ENST00000545435 363 ntBASIC19.28■□□□□ 0.68
RIF1Q5UIP0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIF1Q5UIP0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIF1Q5UIP0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 NUS1P1-201ENST00000446295 882 ntBASIC19.27■□□□□ 0.67
RIF1Q5UIP0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.67
RIF1Q5UIP0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIF1Q5UIP0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 AC112907.2-201ENST00000448639 330 ntBASIC19.26■□□□□ 0.67
RIF1Q5UIP0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RIF1Q5UIP0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 KRT8P8-201ENST00000434750 1448 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 Z85996.1-201ENST00000494644 937 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 NEK4P2-201ENST00000580004 1012 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 AL121672.3-201ENST00000608644 468 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RIF1Q5UIP0 KRT8P36-201ENST00000489121 1440 ntBASIC19.25■□□□□ 0.67
RIF1Q5UIP0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms