Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 MESTP1-201ENST00000404287 994 ntBASIC23.77■■□□□ 1.4
PDS5AQ29RF7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.77■■□□□ 1.4
PDS5AQ29RF7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDS5AQ29RF7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 AC079598.2-202ENST00000546624 1451 ntBASIC23.76■■□□□ 1.39
PDS5AQ29RF7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 UNC93B2-201ENST00000285383 730 ntBASIC23.76■■□□□ 1.39
PDS5AQ29RF7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 ECEL1P3-201ENST00000427961 737 ntBASIC23.76■■□□□ 1.39
PDS5AQ29RF7 AC004980.1-204ENST00000429707 299 ntBASIC23.76■■□□□ 1.39
PDS5AQ29RF7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.76■■□□□ 1.39
PDS5AQ29RF7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDS5AQ29RF7 AC009237.14-201ENST00000609975 1594 ntBASIC23.74■■□□□ 1.39
PDS5AQ29RF7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 MMP23A-201ENST00000234610 1017 ntBASIC23.74■■□□□ 1.39
PDS5AQ29RF7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 HLA-A-209ENST00000638375 975 ntBASIC23.74■■□□□ 1.39
PDS5AQ29RF7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
PDS5AQ29RF7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 DGCR10-201ENST00000609839 495 ntBASIC23.73■■□□□ 1.39
PDS5AQ29RF7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 KRT8P8-201ENST00000434750 1448 ntBASIC23.73■■□□□ 1.39
PDS5AQ29RF7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDS5AQ29RF7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 FSCN1P1-201ENST00000568912 1481 ntBASIC23.72■■□□□ 1.39
PDS5AQ29RF7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 FITM1-202ENST00000559294 800 ntBASIC23.72■■□□□ 1.39
PDS5AQ29RF7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms