Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.76■□□□□ 0.59
RAE1P78406 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAE1P78406 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.76■□□□□ 0.59
RAE1P78406 AL390719.1-204ENST00000412397 1219 ntBASIC18.76■□□□□ 0.59
RAE1P78406 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.76■□□□□ 0.59
RAE1P78406 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.76■□□□□ 0.59
RAE1P78406 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RAE1P78406 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.76■□□□□ 0.59
RAE1P78406 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.76■□□□□ 0.59
RAE1P78406 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.76■□□□□ 0.59
RAE1P78406 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.76■□□□□ 0.59
RAE1P78406 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.76■□□□□ 0.59
RAE1P78406 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAE1P78406 TFP1-202ENST00000475455 1573 ntBASIC18.76■□□□□ 0.59
RAE1P78406 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
RAE1P78406 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.75■□□□□ 0.59
RAE1P78406 AC124283.5-201ENST00000624661 1809 ntBASIC18.75■□□□□ 0.59
RAE1P78406 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.75■□□□□ 0.59
RAE1P78406 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 AC097658.1-201ENST00000475555 843 ntBASIC18.75■□□□□ 0.59
RAE1P78406 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
RAE1P78406 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.75■□□□□ 0.59
RAE1P78406 AC083880.1-201ENST00000608266 535 ntBASIC18.75■□□□□ 0.59
RAE1P78406 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 Z82202.1-201ENST00000623446 1880 ntBASIC18.75■□□□□ 0.59
RAE1P78406 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAE1P78406 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAE1P78406 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RAE1P78406 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.74■□□□□ 0.59
RAE1P78406 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAE1P78406 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.74■□□□□ 0.59
RAE1P78406 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAE1P78406 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAE1P78406 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.74■□□□□ 0.59
RAE1P78406 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.74■□□□□ 0.59
RAE1P78406 AL109923.1-201ENST00000618799 583 ntBASIC18.74■□□□□ 0.59
RAE1P78406 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAE1P78406 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
RAE1P78406 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
RAE1P78406 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAE1P78406 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAE1P78406 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.73■□□□□ 0.59
RAE1P78406 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 AC090192.1-201ENST00000517740 490 ntBASIC18.73■□□□□ 0.59
RAE1P78406 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.73■□□□□ 0.59
RAE1P78406 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.73■□□□□ 0.59
RAE1P78406 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.73■□□□□ 0.59
RAE1P78406 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAE1P78406 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
RAE1P78406 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.72■□□□□ 0.59
RAE1P78406 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAE1P78406 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAE1P78406 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAE1P78406 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.72■□□□□ 0.59
RAE1P78406 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAE1P78406 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.72■□□□□ 0.59
RAE1P78406 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.72■□□□□ 0.59
RAE1P78406 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms