Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EPHB3P54753 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB3P54753 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB3P54753 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.69■□□□□ 0.9
EPHB3P54753 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
EPHB3P54753 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
EPHB3P54753 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 MIR1238-201ENST00000408483 83 ntBASIC20.68■□□□□ 0.9
EPHB3P54753 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 AL445675.2-201ENST00000620291 557 ntBASIC20.68■□□□□ 0.9
EPHB3P54753 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHB3P54753 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
EPHB3P54753 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB3P54753 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB3P54753 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB3P54753 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
EPHB3P54753 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EPHB3P54753 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 MIR1224-201ENST00000408193 85 ntBASIC20.67■□□□□ 0.9
EPHB3P54753 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB3P54753 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.67■□□□□ 0.9
EPHB3P54753 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHB3P54753 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB3P54753 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHB3P54753 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB3P54753 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EPHB3P54753 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EPHB3P54753 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB3P54753 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
EPHB3P54753 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHB3P54753 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHB3P54753 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHB3P54753 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHB3P54753 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.66■□□□□ 0.9
EPHB3P54753 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.66■□□□□ 0.9
EPHB3P54753 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.66■□□□□ 0.9
EPHB3P54753 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EPHB3P54753 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB3P54753 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EPHB3P54753 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHB3P54753 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
EPHB3P54753 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB3P54753 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.65■□□□□ 0.9
EPHB3P54753 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.65■□□□□ 0.9
EPHB3P54753 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
EPHB3P54753 AC026271.3-201ENST00000571884 352 ntBASIC20.65■□□□□ 0.9
EPHB3P54753 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHB3P54753 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB3P54753 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB3P54753 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
EPHB3P54753 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB3P54753 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.64■□□□□ 0.9
EPHB3P54753 FSCN1P1-201ENST00000568912 1481 ntBASIC20.64■□□□□ 0.89
EPHB3P54753 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB3P54753 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EPHB3P54753 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
EPHB3P54753 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EPHB3P54753 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.64■□□□□ 0.89
EPHB3P54753 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB3P54753 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.64■□□□□ 0.89
EPHB3P54753 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHB3P54753 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHB3P54753 AC131212.4-201ENST00000623606 975 ntBASIC20.64■□□□□ 0.89
EPHB3P54753 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms