Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 TMEM14B-214ENST00000480194 455 ntTSL 511.85□□□□□ -0.511e-15■■■□□ 17.1
SUB1P53999 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.52□□□□□ -0.571e-15■■■□□ 17.1
SUB1P53999 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.52□□□□□ -0.571e-15■■■□□ 17.1
SUB1P53999 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)11.25□□□□□ -0.611e-15■■■□□ 17.1
SUB1P53999 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.621e-15■■■□□ 17.1
SUB1P53999 TMEM14B-216ENST00000486421 505 ntTSL 511.17□□□□□ -0.621e-15■■■□□ 17.1
SUB1P53999 TMEM14B-209ENST00000473166 752 ntTSL 311.02□□□□□ -0.651e-15■■■□□ 17.1
SUB1P53999 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.71e-15■■■□□ 17.1
SUB1P53999 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC10.19□□□□□ -0.781e-15■■■□□ 17.1
SUB1P53999 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC10.04□□□□□ -0.81e-15■■■□□ 17.1
SUB1P53999 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC9.87□□□□□ -0.831e-15■■■□□ 17.1
SUB1P53999 TMEM14B-218ENST00000491103 871 ntTSL 59.6□□□□□ -0.871e-15■■■□□ 17.1
SUB1P53999 TMEM14B-211ENST00000473807 559 ntTSL 49.44□□□□□ -0.91e-15■■■□□ 17.1
SUB1P53999 TMEM14B-213ENST00000478732 344 ntTSL 58.96□□□□□ -0.981e-15■■■□□ 17.1
SUB1P53999 TMEM14B-205ENST00000463100 502 ntTSL 47.65□□□□□ -1.181e-15■■■□□ 17.1
SUB1P53999 TMEM14B-207ENST00000467229 483 ntTSL 34.43□□□□□ -1.71e-15■■■□□ 17.1
SUB1P53999 IDH3B-207ENST00000477689 608 ntTSL 59.49□□□□□ -0.893e-7■■■□□ 17.1
SUB1P53999 IDH3B-204ENST00000466494 677 ntTSL 28.83□□□□□ -13e-7■■■□□ 17.1
SUB1P53999 IDH3B-211ENST00000492240 964 ntTSL 57.8□□□□□ -1.163e-7■■■□□ 17.1
SUB1P53999 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC9.52□□□□□ -0.891e-9■■■□□ 17
SUB1P53999 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.96□□□□□ -1.941e-18■■■□□ 17
SUB1P53999 RHOT2-218ENST00000568636 3098 ntTSL 213.26□□□□□ -0.296e-7■■■□□ 17
SUB1P53999 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.636e-8■■■□□ 17
SUB1P53999 SRP14-203ENST00000558527 791 ntTSL 29.24□□□□□ -0.936e-8■■■□□ 17
SUB1P53999 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.02□□□□□ -0.489e-8■■■□□ 17
SUB1P53999 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.036e-8■■■□□ 17
SUB1P53999 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.716e-8■■■□□ 17
SUB1P53999 COX7A2L-207ENST00000482463 1918 ntTSL 28.98□□□□□ -0.976e-8■■■□□ 17
SUB1P53999 COX7A2L-206ENST00000468711 516 ntTSL 36.5□□□□□ -1.376e-8■■■□□ 17
SUB1P53999 EIF3D-204ENST00000426531 710 ntTSL 27.34□□□□□ -1.238e-7■■■□□ 17
SUB1P53999 EIF3D-208ENST00000458572 883 ntTSL 36.62□□□□□ -1.358e-7■■■□□ 17
SUB1P53999 CAPNS1-212ENST00000591041 812 ntTSL 318.28■□□□□ 0.523e-6■■■□□ 17
SUB1P53999 CAPNS1-213ENST00000592354 690 ntTSL 29.89□□□□□ -0.833e-6■■■□□ 17
SUB1P53999 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.41e-6■■■□□ 17
SUB1P53999 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.519e-7■■■□□ 16.9
SUB1P53999 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.059e-7■■■□□ 16.9
SUB1P53999 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.2□□□□□ -0.149e-7■■■□□ 16.9
SUB1P53999 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.62□□□□□ -0.239e-7■■■□□ 16.9
SUB1P53999 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.319e-7■■■□□ 16.9
SUB1P53999 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.89□□□□□ -0.359e-7■■■□□ 16.9
SUB1P53999 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.359e-7■■■□□ 16.9
SUB1P53999 BCL2L12-209ENST00000601168 416 ntTSL 212.16□□□□□ -0.469e-7■■■□□ 16.9
SUB1P53999 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.45□□□□□ -0.589e-7■■■□□ 16.9
SUB1P53999 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.34□□□□□ -0.599e-7■■■□□ 16.9
SUB1P53999 BCL2L12-207ENST00000598979 893 ntTSL 310.71□□□□□ -0.699e-7■■■□□ 16.9
SUB1P53999 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC9.82□□□□□ -0.849e-7■■■□□ 16.9
SUB1P53999 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.33e-6■■■□□ 16.9
SUB1P53999 GAS5-205ENST00000422008 497 ntTSL 33.82□□□□□ -1.88e-16■■■□□ 16.9
SUB1P53999 SLC25A3-205ENST00000547444 517 ntTSL 1 (best)6.43□□□□□ -1.386e-7■■■□□ 16.9
SUB1P53999 RPLP0-222ENST00000551336 406 ntTSL 314.67□□□□□ -0.062e-11■■■□□ 16.9
SUB1P53999 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.11□□□□□ -0.311e-12■■■□□ 16.9
SUB1P53999 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.32□□□□□ -0.64e-6■■■□□ 16.9
SUB1P53999 RPL24-205ENST00000488288 1857 ntTSL 28.43□□□□□ -1.061e-33■■■□□ 16.8
SUB1P53999 RPS16-203ENST00000595386 1035 ntTSL 212.12□□□□□ -0.472e-23■■■□□ 16.8
SUB1P53999 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.57□□□□□ -0.722e-23■■■□□ 16.8
SUB1P53999 RPS16-206ENST00000601390 2389 ntTSL 28.87□□□□□ -0.992e-23■■■□□ 16.8
SUB1P53999 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -12e-23■■■□□ 16.8
SUB1P53999 RPS16-208ENST00000602153 444 ntTSL 27.92□□□□□ -1.142e-23■■■□□ 16.8
SUB1P53999 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC7.39□□□□□ -1.232e-23■■■□□ 16.8
SUB1P53999 RPS16-205ENST00000599705 407 ntTSL 37.36□□□□□ -1.232e-23■■■□□ 16.8
SUB1P53999 RPS16-204ENST00000599539 555 ntTSL 2 BASIC7.33□□□□□ -1.242e-23■■■□□ 16.8
SUB1P53999 SSR2-205ENST00000472467 1833 ntTSL 26.84□□□□□ -1.316e-8■■■□□ 16.8
SUB1P53999 PICALM-220ENST00000532603 566 ntTSL 42.52□□□□□ -2.017e-24■■■□□ 16.8
SUB1P53999 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.525e-7■■■□□ 16.8
SUB1P53999 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.725e-7■■■□□ 16.8
SUB1P53999 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.33□□□□□ -0.765e-7■■■□□ 16.8
SUB1P53999 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■■□□ 16.8
SUB1P53999 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■■□□ 16.8
SUB1P53999 ATF6B-216ENST00000494022 320 ntTSL 29.41□□□□□ -0.91e-6■■■□□ 16.8
SUB1P53999 HNRNPU-214ENST00000638475 2698 ntTSL 511.59□□□□□ -0.551e-8■■■□□ 16.8
SUB1P53999 HNRNPU-221ENST00000639824 1450 ntTSL 59.22□□□□□ -0.931e-8■■■□□ 16.8
SUB1P53999 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.87□□□□□ -0.191e-13■■■□□ 16.8
SUB1P53999 CCNG1-212ENST00000512532 540 ntTSL 22.29□□□□□ -2.041e-13■■■□□ 16.8
SUB1P53999 GAS5-216ENST00000443799 897 ntTSL 57.1□□□□□ -1.271e-15■■■□□ 16.8
SUB1P53999 COX7A2L-205ENST00000464443 895 ntTSL 313.77□□□□□ -0.212e-9■■■□□ 16.8
SUB1P53999 COX7A2L-208ENST00000607768 614 ntTSL 36.7□□□□□ -1.342e-9■■■□□ 16.8
SUB1P53999 TMEM214-202ENST00000321326 2700 ntTSL 216.1■□□□□ 0.174e-6■■■□□ 16.8
SUB1P53999 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.26■□□□□ 0.034e-6■■■□□ 16.8
SUB1P53999 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.124e-6■■■□□ 16.8
SUB1P53999 TMEM214-205ENST00000434544 834 ntTSL 213.11□□□□□ -0.314e-6■■■□□ 16.8
SUB1P53999 TMEM214-208ENST00000460665 1967 ntTSL 211.32□□□□□ -0.64e-6■■■□□ 16.8
SUB1P53999 TMEM214-210ENST00000469445 900 ntTSL 28.42□□□□□ -1.064e-6■■■□□ 16.8
SUB1P53999 GTSF1-202ENST00000546575 458 ntTSL 23.4□□□□□ -1.875e-7■■■□□ 16.8
SUB1P53999 CENPX-203ENST00000577379 861 ntTSL 517.21■□□□□ 0.353e-7■■■□□ 16.7
SUB1P53999 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.323e-7■■■□□ 16.7
SUB1P53999 CENPX-209ENST00000584514 882 ntTSL 214.26□□□□□ -0.133e-7■■■□□ 16.7
SUB1P53999 CENPX-207ENST00000583767 894 ntTSL 314.14□□□□□ -0.153e-7■■■□□ 16.7
SUB1P53999 CENPX-205ENST00000580090 752 ntTSL 214.13□□□□□ -0.153e-7■■■□□ 16.7
SUB1P53999 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.223e-7■■■□□ 16.7
SUB1P53999 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.323e-7■■■□□ 16.7
SUB1P53999 CENPX-204ENST00000579520 702 ntTSL 312.94□□□□□ -0.343e-7■■■□□ 16.7
SUB1P53999 CENPX-210ENST00000584600 730 ntTSL 212.15□□□□□ -0.463e-7■■■□□ 16.7
SUB1P53999 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.04□□□□□ -0.643e-7■■■□□ 16.7
SUB1P53999 MYB-202ENST00000339290 3365 ntTSL 1 (best)14.37□□□□□ -0.113e-7■■■□□ 16.7
SUB1P53999 MYB-214ENST00000525477 3431 ntTSL 1 (best)13.77□□□□□ -0.213e-7■■■□□ 16.7
SUB1P53999 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.223e-7■■■□□ 16.7
SUB1P53999 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.273e-7■■■□□ 16.7
SUB1P53999 MYB-237ENST00000533837 3492 ntTSL 1 (best)13.15□□□□□ -0.33e-7■■■□□ 16.7
SUB1P53999 MYB-210ENST00000463282 3422 ntTSL 1 (best)13.12□□□□□ -0.313e-7■■■□□ 16.7
SUB1P53999 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.313e-7■■■□□ 16.7
Retrieved 100 of 11,644 protein–RNA pairs in 231.6 ms