Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCNKAP51800 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLCNKAP51800 TFP1-202ENST00000475455 1573 ntBASIC19.38■□□□□ 0.69
CLCNKAP51800 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCNKAP51800 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCNKAP51800 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCNKAP51800 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 AL135905.2-201ENST00000584934 1404 ntBASIC19.38■□□□□ 0.69
CLCNKAP51800 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCNKAP51800 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.38■□□□□ 0.69
CLCNKAP51800 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLCNKAP51800 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLCNKAP51800 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.37■□□□□ 0.69
CLCNKAP51800 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 PHGDH-210ENST00000641115 1638 ntBASIC19.37■□□□□ 0.69
CLCNKAP51800 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLCNKAP51800 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCNKAP51800 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 AC233702.5-201ENST00000584107 538 ntBASIC19.37■□□□□ 0.69
CLCNKAP51800 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLCNKAP51800 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCNKAP51800 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLCNKAP51800 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCNKAP51800 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCNKAP51800 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCNKAP51800 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLCNKAP51800 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCNKAP51800 Z99916.2-201ENST00000604037 246 ntBASIC19.36■□□□□ 0.69
CLCNKAP51800 AC004264.1-201ENST00000608354 794 ntBASIC19.36■□□□□ 0.69
CLCNKAP51800 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLCNKAP51800 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCNKAP51800 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCNKAP51800 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC018553.1-201ENST00000616682 1458 ntBASIC19.35■□□□□ 0.69
CLCNKAP51800 RNF165-205ENST00000588679 2904 ntBASIC19.35■□□□□ 0.69
CLCNKAP51800 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCNKAP51800 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCNKAP51800 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 RPS2P55-201ENST00000397318 883 ntBASIC19.35■□□□□ 0.69
CLCNKAP51800 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCNKAP51800 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC107956.1-201ENST00000494359 873 ntBASIC19.35■□□□□ 0.69
CLCNKAP51800 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCNKAP51800 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms