Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SSR1P43307 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SSR1P43307 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.96■□□□□ 0.95
SSR1P43307 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 AL589743.5-201ENST00000616611 1050 ntBASIC20.96■□□□□ 0.95
SSR1P43307 AC092437.1-201ENST00000624794 1048 ntBASIC20.96■□□□□ 0.95
SSR1P43307 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
SSR1P43307 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.96■□□□□ 0.95
SSR1P43307 KRT8P17-201ENST00000453110 1448 ntBASIC20.95■□□□□ 0.95
SSR1P43307 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR1P43307 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR1P43307 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR1P43307 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR1P43307 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 AC073111.5-205ENST00000641717 521 ntBASIC20.95■□□□□ 0.94
SSR1P43307 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SSR1P43307 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR1P43307 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SSR1P43307 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR1P43307 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SSR1P43307 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.94■□□□□ 0.94
SSR1P43307 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SSR1P43307 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.94■□□□□ 0.94
SSR1P43307 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR1P43307 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SSR1P43307 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SSR1P43307 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.93■□□□□ 0.94
SSR1P43307 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.93■□□□□ 0.94
SSR1P43307 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.93■□□□□ 0.94
SSR1P43307 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.93■□□□□ 0.94
SSR1P43307 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SSR1P43307 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
SSR1P43307 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SSR1P43307 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 KRT17P1-201ENST00000399211 1546 ntBASIC20.93■□□□□ 0.94
SSR1P43307 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SSR1P43307 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 PTBP1P-201ENST00000554374 1601 ntBASIC20.93■□□□□ 0.94
SSR1P43307 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSR1P43307 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.92■□□□□ 0.94
SSR1P43307 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR1P43307 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.92■□□□□ 0.94
SSR1P43307 LSM12P1-201ENST00000411836 588 ntBASIC20.92■□□□□ 0.94
SSR1P43307 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR1P43307 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 KRT16P6-202ENST00000425692 1426 ntBASIC20.92■□□□□ 0.94
SSR1P43307 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms