Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC1A1P43005 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC1A1P43005 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A1P43005 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A1P43005 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A1P43005 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A1P43005 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC1A1P43005 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC1A1P43005 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLC1A1P43005 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A1P43005 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC1A1P43005 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A1P43005 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SLC1A1P43005 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A1P43005 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 AL050303.2-201ENST00000619798 666 ntBASIC20.67■□□□□ 0.9
SLC1A1P43005 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A1P43005 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A1P43005 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A1P43005 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC1A1P43005 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A1P43005 AC026185.1-201ENST00000445748 174 ntBASIC20.66■□□□□ 0.9
SLC1A1P43005 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.66■□□□□ 0.9
SLC1A1P43005 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLC1A1P43005 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A1P43005 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SLC1A1P43005 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SLC1A1P43005 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A1P43005 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC1A1P43005 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 AC116351.2-201ENST00000606540 1585 ntBASIC20.65■□□□□ 0.9
SLC1A1P43005 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A1P43005 AC018553.1-201ENST00000616682 1458 ntBASIC20.65■□□□□ 0.9
SLC1A1P43005 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 BX276092.2-201ENST00000417668 665 ntBASIC20.65■□□□□ 0.9
SLC1A1P43005 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A1P43005 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC1A1P43005 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A1P43005 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SLC1A1P43005 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A1P43005 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SLC1A1P43005 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SLC1A1P43005 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A1P43005 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC1A1P43005 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC1A1P43005 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A1P43005 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A1P43005 IKBKGP1-201ENST00000612193 1073 ntBASIC20.64■□□□□ 0.89
SLC1A1P43005 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SLC1A1P43005 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A1P43005 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC1A1P43005 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC1A1P43005 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC1A1P43005 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms