Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AC116562.4-201ENST00000641316 2276 ntBASIC18.75■□□□□ 0.59
RPL3P39023 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
RPL3P39023 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 GPX1P1-201ENST00000388829 606 ntBASIC18.74■□□□□ 0.59
RPL3P39023 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.74■□□□□ 0.59
RPL3P39023 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL3P39023 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.74■□□□□ 0.59
RPL3P39023 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPL3P39023 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.73■□□□□ 0.59
RPL3P39023 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RPL3P39023 AC092437.1-201ENST00000624794 1048 ntBASIC18.73■□□□□ 0.59
RPL3P39023 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.73■□□□□ 0.59
RPL3P39023 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.73■□□□□ 0.59
RPL3P39023 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPL3P39023 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.72■□□□□ 0.59
RPL3P39023 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPL3P39023 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 AL390719.1-204ENST00000412397 1219 ntBASIC18.72■□□□□ 0.59
RPL3P39023 BX276092.2-201ENST00000417668 665 ntBASIC18.72■□□□□ 0.59
RPL3P39023 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.72■□□□□ 0.59
RPL3P39023 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.72■□□□□ 0.59
RPL3P39023 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPL3P39023 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL3P39023 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPL3P39023 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPL3P39023 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.71■□□□□ 0.59
RPL3P39023 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RPL3P39023 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RPL3P39023 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RPL3P39023 CDCA4P2-201ENST00000441182 718 ntBASIC18.71■□□□□ 0.59
RPL3P39023 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.71■□□□□ 0.59
RPL3P39023 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.71■□□□□ 0.59
RPL3P39023 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.71■□□□□ 0.59
RPL3P39023 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RPL3P39023 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RPL3P39023 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL3P39023 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
RPL3P39023 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms