Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBB4AP04350 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TUBB4AP04350 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB4AP04350 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBB4AP04350 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBB4AP04350 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.17■□□□□ 0.98
TUBB4AP04350 AC126544.1-201ENST00000580842 1059 ntBASIC21.17■□□□□ 0.98
TUBB4AP04350 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBB4AP04350 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBB4AP04350 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBB4AP04350 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB4AP04350 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TUBB4AP04350 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBB4AP04350 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBB4AP04350 AC104581.1-202ENST00000635932 2618 ntBASIC21.17■□□□□ 0.98
TUBB4AP04350 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB4AP04350 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TUBB4AP04350 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB4AP04350 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB4AP04350 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
TUBB4AP04350 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB4AP04350 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB4AP04350 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TUBB4AP04350 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
TUBB4AP04350 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB4AP04350 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB4AP04350 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBB4AP04350 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB4AP04350 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBB4AP04350 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB4AP04350 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TUBB4AP04350 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBB4AP04350 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB4AP04350 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB4AP04350 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TUBB4AP04350 AL161938.1-201ENST00000569833 2180 ntBASIC21.16■□□□□ 0.98
TUBB4AP04350 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBB4AP04350 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBB4AP04350 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBB4AP04350 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TUBB4AP04350 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBB4AP04350 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBB4AP04350 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBB4AP04350 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 AC138907.5-202ENST00000569484 235 ntBASIC21.15■□□□□ 0.98
TUBB4AP04350 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBB4AP04350 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBB4AP04350 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB4AP04350 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB4AP04350 AC093525.10-201ENST00000625130 1569 ntBASIC21.14■□□□□ 0.98
TUBB4AP04350 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB4AP04350 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB4AP04350 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB4AP04350 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB4AP04350 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.14■□□□□ 0.98
TUBB4AP04350 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.14■□□□□ 0.97
TUBB4AP04350 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.14■□□□□ 0.97
TUBB4AP04350 AC007322.3-201ENST00000426526 701 ntBASIC21.14■□□□□ 0.97
TUBB4AP04350 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBB4AP04350 AL358852.1-201ENST00000623174 1268 ntBASIC21.14■□□□□ 0.97
TUBB4AP04350 Z98044.1-201ENST00000632503 1764 ntBASIC21.14■□□□□ 0.97
TUBB4AP04350 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 NOC2LP1-202ENST00000452600 2235 ntBASIC21.14■□□□□ 0.97
TUBB4AP04350 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
TUBB4AP04350 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBB4AP04350 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB4AP04350 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.13■□□□□ 0.97
TUBB4AP04350 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB4AP04350 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB4AP04350 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 AL031598.1-201ENST00000561511 1773 ntBASIC21.13■□□□□ 0.97
TUBB4AP04350 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB4AP04350 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.13■□□□□ 0.97
TUBB4AP04350 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TUBB4AP04350 PGM5P4-201ENST00000421970 445 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms