Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC087289.5-201ENST00000586076 3175 ntBASIC18.39■□□□□ 0.53
TRIM3O75382 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM3O75382 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM3O75382 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM3O75382 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM3O75382 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM3O75382 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM3O75382 AC006058.3-201ENST00000606217 1069 ntBASIC18.38■□□□□ 0.53
TRIM3O75382 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM3O75382 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM3O75382 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM3O75382 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM3O75382 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM3O75382 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 AC020907.5-201ENST00000624372 1936 ntBASIC18.37■□□□□ 0.53
TRIM3O75382 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM3O75382 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM3O75382 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM3O75382 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 AC023632.3-201ENST00000521633 145 ntBASIC18.37■□□□□ 0.53
TRIM3O75382 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM3O75382 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM3O75382 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM3O75382 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM3O75382 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TRIM3O75382 PRORSD1P-201ENST00000295112 541 ntBASIC18.36■□□□□ 0.53
TRIM3O75382 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM3O75382 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM3O75382 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM3O75382 AC128676.1-201ENST00000454392 318 ntBASIC18.36■□□□□ 0.53
TRIM3O75382 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM3O75382 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM3O75382 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM3O75382 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM3O75382 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM3O75382 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM3O75382 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM3O75382 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
TRIM3O75382 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM3O75382 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM3O75382 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 AL390719.1-204ENST00000412397 1219 ntBASIC18.35■□□□□ 0.53
TRIM3O75382 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms