Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC28A1O00337 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC28A1O00337 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC28A1O00337 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC28A1O00337 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC28A1O00337 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 LSM12P1-201ENST00000411836 588 ntBASIC19.01■□□□□ 0.63
SLC28A1O00337 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC28A1O00337 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLC28A1O00337 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A1O00337 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A1O00337 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19■□□□□ 0.63
SLC28A1O00337 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC28A1O00337 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC28A1O00337 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19■□□□□ 0.63
SLC28A1O00337 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19■□□□□ 0.63
SLC28A1O00337 AC022517.1-201ENST00000592429 346 ntBASIC19■□□□□ 0.63
SLC28A1O00337 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC28A1O00337 Z82202.1-201ENST00000623446 1880 ntBASIC19■□□□□ 0.63
SLC28A1O00337 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC28A1O00337 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19■□□□□ 0.63
SLC28A1O00337 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A1O00337 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC28A1O00337 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC28A1O00337 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A1O00337 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A1O00337 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC28A1O00337 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A1O00337 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 AC087289.5-201ENST00000586076 3175 ntBASIC18.99■□□□□ 0.63
SLC28A1O00337 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC28A1O00337 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A1O00337 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A1O00337 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC28A1O00337 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SLC28A1O00337 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC28A1O00337 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC28A1O00337 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC28A1O00337 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SLC28A1O00337 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC28A1O00337 AC004911.1-201ENST00000416316 871 ntBASIC18.98■□□□□ 0.63
SLC28A1O00337 AC133552.2-202ENST00000575694 574 ntBASIC18.98■□□□□ 0.63
SLC28A1O00337 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC28A1O00337 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A1O00337 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SLC28A1O00337 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SLC28A1O00337 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms