Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
HFM1A2PYH4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
HFM1A2PYH4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC29.36■■■□□ 2.29
HFM1A2PYH4 AP001412.1-201ENST00000608405 714 ntBASIC29.36■■■□□ 2.29
HFM1A2PYH4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
HFM1A2PYH4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
HFM1A2PYH4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
HFM1A2PYH4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
HFM1A2PYH4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
HFM1A2PYH4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
HFM1A2PYH4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
HFM1A2PYH4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
HFM1A2PYH4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC29.35■■■□□ 2.29
HFM1A2PYH4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
HFM1A2PYH4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
HFM1A2PYH4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
HFM1A2PYH4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
HFM1A2PYH4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
HFM1A2PYH4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 CD177P1-201ENST00000606252 935 ntBASIC29.34■■■□□ 2.29
HFM1A2PYH4 AC073195.1-201ENST00000607241 877 ntBASIC29.34■■■□□ 2.29
HFM1A2PYH4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC29.34■■■□□ 2.29
HFM1A2PYH4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
HFM1A2PYH4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
HFM1A2PYH4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
HFM1A2PYH4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
HFM1A2PYH4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC29.33■■■□□ 2.29
HFM1A2PYH4 MIR4785-201ENST00000585005 73 ntBASIC29.33■■■□□ 2.29
HFM1A2PYH4 AL445675.2-201ENST00000620291 557 ntBASIC29.33■■■□□ 2.29
HFM1A2PYH4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
HFM1A2PYH4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 TUBB8P6-201ENST00000436895 1288 ntBASIC29.32■■■□□ 2.28
HFM1A2PYH4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC29.32■■■□□ 2.28
HFM1A2PYH4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
HFM1A2PYH4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 KSR1P1-201ENST00000446298 240 ntBASIC29.31■■■□□ 2.28
HFM1A2PYH4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 AC026271.3-201ENST00000571884 352 ntBASIC29.31■■■□□ 2.28
HFM1A2PYH4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
HFM1A2PYH4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HFM1A2PYH4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
HFM1A2PYH4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
HFM1A2PYH4 NUDT16P1-203ENST00000513809 620 ntBASIC29.3■■■□□ 2.28
HFM1A2PYH4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
HFM1A2PYH4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
HFM1A2PYH4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC29.3■■■□□ 2.28
HFM1A2PYH4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
HFM1A2PYH4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
HFM1A2PYH4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
HFM1A2PYH4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
HFM1A2PYH4 FAM197Y1-201ENST00000421178 764 ntBASIC29.29■■■□□ 2.28
HFM1A2PYH4 AP002982.1-201ENST00000492365 877 ntBASIC29.29■■■□□ 2.28
HFM1A2PYH4 AL355075.4-201ENST00000554988 638 ntBASIC29.29■■■□□ 2.28
HFM1A2PYH4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC29.29■■■□□ 2.28
HFM1A2PYH4 AC026471.5-201ENST00000615068 467 ntBASIC29.29■■■□□ 2.28
HFM1A2PYH4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
HFM1A2PYH4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
HFM1A2PYH4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms