Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 AC004951.3-201ENST00000418645 1148 ntBASIC23.18■■□□□ 1.3
SSC5DA1L4H1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SSC5DA1L4H1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SSC5DA1L4H1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 AC092338.2-201ENST00000568827 1415 ntBASIC23.16■■□□□ 1.3
SSC5DA1L4H1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 AC133561.1-201ENST00000568600 2415 ntBASIC23.16■■□□□ 1.3
SSC5DA1L4H1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 FAM207BP-201ENST00000447172 505 ntBASIC23.16■■□□□ 1.3
SSC5DA1L4H1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 AP000550.4-202ENST00000639755 178 ntBASIC23.16■■□□□ 1.3
SSC5DA1L4H1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.16■■□□□ 1.3
SSC5DA1L4H1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 DUSP5P1-201ENST00000441325 1139 ntBASIC23.15■■□□□ 1.3
SSC5DA1L4H1 KRT18P56-201ENST00000507275 550 ntBASIC23.15■■□□□ 1.3
SSC5DA1L4H1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 AC116562.4-202ENST00000641738 218 ntBASIC23.15■■□□□ 1.3
SSC5DA1L4H1 PHGDH-210ENST00000641115 1638 ntBASIC23.15■■□□□ 1.3
SSC5DA1L4H1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 FP700111.2-201ENST00000619190 1892 ntBASIC23.15■■□□□ 1.3
SSC5DA1L4H1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSC5DA1L4H1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSC5DA1L4H1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 SLC25A1P2-201ENST00000430693 912 ntBASIC23.14■■□□□ 1.29
SSC5DA1L4H1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 AC010653.2-201ENST00000623505 997 ntBASIC23.14■■□□□ 1.29
SSC5DA1L4H1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.14■■□□□ 1.29
SSC5DA1L4H1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 TSPY5P-201ENST00000426936 936 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 CCR12P-201ENST00000446203 998 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 COX11P1-201ENST00000489116 835 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 FAM86EP-206ENST00000510506 987 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AL023803.3-201ENST00000615559 522 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AC141257.4-201ENST00000634557 245 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AC136944.6-201ENST00000634818 245 ntBASIC23.13■■□□□ 1.29
SSC5DA1L4H1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms