Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 Z82202.1-201ENST00000623446 1880 ntBASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV5S1A1TA0A578 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 UNC93B4-201ENST00000505679 747 ntBASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 UNC93B5-201ENST00000530315 699 ntBASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 AC008687.6-201ENST00000596318 630 ntBASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 AC008403.3-201ENST00000598924 454 ntBASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV5S1A1TA0A578 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TCRBV5S1A1TA0A578 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TCRBV5S1A1TA0A578 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 AC005332.7-201ENST00000614046 2005 ntBASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TCRBV5S1A1TA0A578 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV5S1A1TA0A578 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.62■□□□□ 0.89
TCRBV5S1A1TA0A578 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms