Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
TRAV27A0A087WT01 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.89■□□□□ 0.46
TRAV27A0A087WT01 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV27A0A087WT01 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV27A0A087WT01 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV27A0A087WT01 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 AC098818.2-201ENST00000564925 2320 ntBASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV27A0A087WT01 RNF165-205ENST00000588679 2904 ntBASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 AC018445.3-201ENST00000624177 1945 ntBASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 PHGDH-210ENST00000641115 1638 ntBASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 AL512625.2-201ENST00000417533 625 ntBASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
TRAV27A0A087WT01 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 IKBKGP1-201ENST00000612193 1073 ntBASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 AC092437.1-201ENST00000624794 1048 ntBASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV27A0A087WT01 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms