Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC116667.2-201ENST00000641075 823 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 OR7A1P-202ENST00000641542 1158 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AKAP17BP-201ENST00000431706 2719 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 LCN1P2-201ENST00000372030 223 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 SNORA70H-201ENST00000383910 135 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 SNORA70J-201ENST00000384182 135 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 MIR1275-201ENST00000408770 80 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 RPS17P17-201ENST00000419392 409 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AKR1B10P1-201ENST00000425765 942 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC099782.1-201ENST00000425889 474 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL645936.1-201ENST00000441979 518 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 GAPDHP23-201ENST00000444823 993 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 HIGD1AP16-201ENST00000450986 258 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC002075.1-201ENST00000457396 676 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC073594.1-201ENST00000462065 364 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 RN7SL362P-201ENST00000494228 267 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 SNX18P24-201ENST00000505249 671 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC122718.2-201ENST00000505325 591 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC112484.3-201ENST00000505910 329 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC095052.1-201ENST00000509955 863 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZNF519P4-201ENST00000514008 125 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 Y_RNA.710-201ENST00000516975 110 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC036111.2-201ENST00000533247 901 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL078601.3-201ENST00000573303 535 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 OR1E3-201ENST00000575608 948 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL591926.1-201ENST00000620542 217 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL683826.1-201ENST00000624104 627 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AC003992.1-201ENST00000635364 557 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 SHQ1P1-201ENST00000437111 1544 ntBASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4BQ9Y4P1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 TMCC1P1-201ENST00000518897 1980 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC073365.1-203ENST00000641055 1992 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 MIR188-201ENST00000385034 86 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AL139805.1-201ENST00000407837 289 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC104339.1-201ENST00000465478 348 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 RPL34P33-201ENST00000486062 334 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 SNX18P25-201ENST00000510539 758 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms