Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL353763.1-201ENST00000624467 1628 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RNA5SP478-201ENST00000364657 115 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 BX510359.3-201ENST00000422168 306 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC245884.2-201ENST00000426257 404 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RPS7P14-201ENST00000426405 583 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RPL23AP19-201ENST00000436229 369 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL512593.1-201ENST00000444758 779 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RPL23AP60-201ENST00000450011 454 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RNA5SP434-201ENST00000516647 121 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL121579.2-201ENST00000555466 590 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 NDUFA5P11-201ENST00000567995 343 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC007346.1-201ENST00000569208 867 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL137246.2-201ENST00000613439 662 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC068769.1-201ENST00000474767 2426 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 MIR433-201ENST00000384837 93 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 TMA16P2-201ENST00000413187 601 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 EMC3-AS1-205ENST00000438698 534 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC006512.2-201ENST00000543250 486 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 CYCSP38-201ENST00000559840 322 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AL357140.4-201ENST00000636827 412 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 AC087269.2-201ENST00000641764 975 ntBASIC5.86□□□□□ -1.47
CCDC88CQ9P219 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC88CQ9P219 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 ZNF101P1-201ENST00000435701 1720 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 OR11H13P-201ENST00000359695 979 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 SNORA43.1-201ENST00000364863 140 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 MTND4LP17-201ENST00000414607 293 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 MORF4-201ENST00000447135 971 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 CST12P-201ENST00000457644 362 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 AC008945.1-201ENST00000505144 499 ntBASIC5.85□□□□□ -1.47
CCDC88CQ9P219 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC88CQ9P219 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms