Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 RNU1-134P-201ENST00000362935 165 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 RNA5SP478-201ENST00000364657 115 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 SNORA43.1-201ENST00000364863 140 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 RNA5SP122-201ENST00000384457 108 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 RNU6-564P-201ENST00000410983 104 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AL356806.1-201ENST00000422524 916 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 OR3D1P-201ENST00000438288 955 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC009237.1-201ENST00000442127 744 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 GAPDHP23-201ENST00000444823 993 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 HLA-DPA3-207ENST00000454398 229 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AL356390.1-201ENST00000455684 397 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC090568.1-201ENST00000509499 856 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC090958.1-201ENST00000511122 351 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 MIR3189-201ENST00000578735 73 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC027243.2-201ENST00000602530 724 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC020763.5-201ENST00000623298 430 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AP001962.1-201ENST00000624114 559 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC073488.3-201ENST00000631611 778 ntBASIC7.07□□□□□ -1.28
COL20A1Q9P218 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ZNF812P-201ENST00000457674 1694 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC005618.1-201ENST00000606901 3148 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 GABARAPL3-201ENST00000412799 354 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 UBE2V1P14-201ENST00000415815 558 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 CYP4F30P-202ENST00000420048 405 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AL590623.1-201ENST00000427864 105 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 RPS29P14-201ENST00000431518 171 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC016908.1-201ENST00000442571 1219 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC098847.1-201ENST00000473094 348 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ATG10-AS1-201ENST00000504846 648 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ADAD1P2-201ENST00000588476 646 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 FO681491.1-202ENST00000623392 737 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 AC119674.1-202ENST00000641333 1860 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 RBMY1HP-201ENST00000382759 1389 ntBASIC7.06□□□□□ -1.28
COL20A1Q9P218 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL20A1Q9P218 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.06□□□□□ -1.28
COL20A1Q9P218 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 AL731556.1-201ENST00000394628 3711 ntBASIC7.05□□□□□ -1.28
COL20A1Q9P218 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL20A1Q9P218 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
COL20A1Q9P218 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms