Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 AL512329.1-201ENST00000404600 1592 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 TPTE2P2-201ENST00000403471 1466 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 AC009779.8-201ENST00000641684 4384 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7□□□□□ -1.29
CD248Q9HCU0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 SNORA7A-201ENST00000384765 139 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 UBE2V1P15-201ENST00000407776 448 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 RPL17P17-201ENST00000419491 557 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 GAPDHP19-201ENST00000431768 1005 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 GAPDHP34-201ENST00000432112 823 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AL451136.1-201ENST00000435399 325 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 AL590399.4-201ENST00000436561 601 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 MTCYBP31-201ENST00000438855 1122 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 CLIC4P1-201ENST00000453177 535 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC010442.1-201ENST00000515583 816 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 RN7SKP287-201ENST00000516546 266 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 RNA5SP278-201ENST00000517055 102 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 RPL41P2-201ENST00000544920 409 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7□□□□□ -1.29
CD248Q9HCU0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 AP005136.2-201ENST00000583253 1049 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 RPL29P33-201ENST00000587474 316 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7□□□□□ -1.29
CD248Q9HCU0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7□□□□□ -1.29
CD248Q9HCU0 AC093424.1-201ENST00000604999 338 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC068726.1-201ENST00000610993 341 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AP005212.3-201ENST00000619964 528 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC004943.1-203ENST00000624370 1074 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AC061999.1-201ENST00000624454 177 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AP000676.4-201ENST00000624659 623 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AL049536.1-201ENST00000625043 744 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 AL049541.2-201ENST00000626377 555 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 NAMPTP1-201ENST00000440465 2514 ntBASIC7□□□□□ -1.29
CD248Q9HCU0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD248Q9HCU0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7□□□□□ -1.29
CD248Q9HCU0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7□□□□□ -1.29
CD248Q9HCU0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
CD248Q9HCU0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CD248Q9HCU0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.99□□□□□ -1.29
CD248Q9HCU0 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.99□□□□□ -1.29
CD248Q9HCU0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.99□□□□□ -1.29
CD248Q9HCU0 AC005225.5-201ENST00000623547 2225 ntBASIC6.99□□□□□ -1.29
CD248Q9HCU0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.99□□□□□ -1.29
CD248Q9HCU0 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD248Q9HCU0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms