Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNA5SP510-201ENST00000364697 99 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RPS14P4-201ENST00000415880 418 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL353662.1-201ENST00000439099 327 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC112187.1-201ENST00000455837 479 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC018638.3-201ENST00000461273 132 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 FTH1P8-201ENST00000498161 514 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC090958.1-201ENST00000511122 351 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RNA5SP438-201ENST00000516561 112 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC008555.7-201ENST00000605008 583 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 USP9YP3-201ENST00000434481 1766 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RN7SKP78-201ENST00000364711 318 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 TMA16P2-201ENST00000413187 601 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 BX284632.2-201ENST00000421091 399 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 BX510359.3-201ENST00000422168 306 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL512605.1-202ENST00000441919 381 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC079922.1-201ENST00000443291 359 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 RPL6P30-201ENST00000443382 862 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL359955.2-201ENST00000445380 353 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AC007494.1-201ENST00000562293 760 ntBASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KIAA1549Q9HCM3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AF287957.1-201ENST00000607368 1595 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 SNORA64.1-201ENST00000362600 132 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 MIR1203-201ENST00000408812 85 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 RPL35AP31-201ENST00000418340 337 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AL355032.1-201ENST00000472981 438 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC093719.1-201ENST00000480427 441 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC104109.1-201ENST00000498563 436 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC073916.1-201ENST00000545095 130 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC027334.1-201ENST00000603257 310 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC092681.3-201ENST00000609463 678 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AP000894.4-201ENST00000610185 483 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KIAA1549Q9HCM3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms