Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC008868.1-201ENST00000509786 737 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 GTF2IP11-201ENST00000526931 420 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 MTND1P8-201ENST00000571424 950 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AL078623.1-201ENST00000602702 907 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 BUB1P1-201ENST00000603541 607 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC012213.4-201ENST00000606457 354 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC093635.1-201ENST00000609028 555 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AL137000.1-201ENST00000610528 1244 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC012254.5-201ENST00000623573 478 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC119674.1-202ENST00000641333 1860 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 RNA5SP442-201ENST00000365050 107 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC007068.1-201ENST00000396690 844 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AL050335.1-201ENST00000396909 869 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AP003170.5-201ENST00000397185 335 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AL359092.1-201ENST00000417156 265 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC092570.3-201ENST00000420113 693 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AL596268.1-201ENST00000427910 1048 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 UBBP5-201ENST00000446970 266 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC093801.2-201ENST00000503966 1050 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC093770.1-201ENST00000511559 571 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SCARNA11.1-201ENST00000516918 132 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC023245.2-201ENST00000530760 2978 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 RN7SL208P-201ENST00000577964 296 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 MIR378H-201ENST00000579966 83 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC005242.1-201ENST00000585658 438 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC004775.1-201ENST00000607389 753 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AP001264.1-201ENST00000620602 703 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC007204.1-201ENST00000621794 555 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 CASC19-261ENST00000641853 1638 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 Z83820.1-201ENST00000456978 1499 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SMG1P5-202ENST00000529428 4219 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 SMG1P2-201ENST00000566127 4221 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 AC074141.1-201ENST00000588129 2995 ntBASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM54Q9BYV2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms