Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
CCDC7Q96M83 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.52□□□□□ -1.04
CCDC7Q96M83 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC079355.1-201ENST00000421770 223 ntBASIC8.52□□□□□ -1.05
CCDC7Q96M83 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC016027.5-201ENST00000427227 210 ntBASIC8.52□□□□□ -1.05
CCDC7Q96M83 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.52□□□□□ -1.05
CCDC7Q96M83 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AC027279.1-201ENST00000568885 4284 ntBASIC8.52□□□□□ -1.05
CCDC7Q96M83 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CCDC7Q96M83 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CCDC7Q96M83 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CCDC7Q96M83 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.52□□□□□ -1.05
CCDC7Q96M83 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CCDC7Q96M83 AL021877.2-201ENST00000624442 10684 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC002553.3-201ENST00000453002 341 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC114728.1-201ENST00000488289 483 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 CYP4F27P-201ENST00000514557 494 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 CR383658.1-201ENST00000514609 734 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 SNORD46.2-201ENST00000516021 102 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AL512652.1-201ENST00000619006 500 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 CASC19-238ENST00000641523 1558 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 OR52B5P-204ENST00000641744 3467 ntBASIC8.51□□□□□ -1.05
CCDC7Q96M83 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CCDC7Q96M83 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC7Q96M83 AC091305.2-201ENST00000624049 1576 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC005725.1-201ENST00000577346 2607 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AL451142.1-201ENST00000375867 775 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC087752.1-201ENST00000391360 558 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 LYPLA1P1-201ENST00000434514 622 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 RPL7L1P3-201ENST00000455249 689 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 PSMA2P2-201ENST00000504319 686 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 RNA5SP271-201ENST00000516700 88 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC007956.1-201ENST00000555623 542 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC007494.1-201ENST00000562293 760 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 FAM72A-208ENST00000607379 1139 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CCDC7Q96M83 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC8.5□□□□□ -1.05
CCDC7Q96M83 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC7Q96M83 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC7Q96M83 SNORA21-201ENST00000362423 132 ntBASIC8.49□□□□□ -1.05
CCDC7Q96M83 RNA5SP477-201ENST00000362639 119 ntBASIC8.49□□□□□ -1.05
CCDC7Q96M83 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CCDC7Q96M83 AL096800.1-201ENST00000405326 893 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms