Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 MSL3P1-202ENST00000440028 1468 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 RNU1-5P-201ENST00000362684 144 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 RNU11-201ENST00000387069 134 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 CYCSP17-201ENST00000407870 315 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 CDC42P6-201ENST00000421246 576 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 RN7SL83P-201ENST00000468131 297 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC104629.1-201ENST00000494226 508 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC021146.11-201ENST00000503319 491 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 NACAP5-201ENST00000509863 636 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 KCTD9P4-201ENST00000526766 1166 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 BTG1P1-201ENST00000540396 508 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AP000619.2-201ENST00000546014 969 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC091304.4-201ENST00000565703 620 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC020914.7-201ENST00000594477 545 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AL360012.1-201ENST00000602813 131 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC096586.2-201ENST00000610260 441 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AL354718.1-201ENST00000619764 589 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 AP000550.3-201ENST00000637734 379 ntBASIC6.4□□□□□ -1.38
VPS50Q96JG6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS50Q96JG6 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS50Q96JG6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS50Q96JG6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS50Q96JG6 AC217777.1-201ENST00000570034 1471 ntBASIC6.4□□□□□ -1.39
VPS50Q96JG6 BRAFP1-201ENST00000445336 2703 ntBASIC6.4□□□□□ -1.39
VPS50Q96JG6 AC027575.3-201ENST00000583058 2747 ntBASIC6.4□□□□□ -1.39
VPS50Q96JG6 AC116158.1-201ENST00000560231 2129 ntBASIC6.4□□□□□ -1.39
VPS50Q96JG6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
VPS50Q96JG6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 DNM1P47-203ENST00000571780 12667 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC027279.4-201ENST00000624371 2072 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RNU6-618P-201ENST00000363518 112 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL589994.1-201ENST00000404962 340 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC099535.1-201ENST00000408928 371 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms