Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 SNORA38B-201ENST00000363524 131 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 RN7SKP237-201ENST00000364663 301 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 RNU11-6P-201ENST00000391127 133 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 NPM1P38-201ENST00000403835 865 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC096537.2-201ENST00000413707 714 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 MTND4LP17-201ENST00000414607 293 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 ARAFP1-201ENST00000422172 605 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 RPS6P14-201ENST00000425165 719 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL590762.3-201ENST00000436372 640 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 TXNP2-201ENST00000443918 295 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 UBBP5-201ENST00000446970 266 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL353718.1-201ENST00000451028 517 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL139156.3-201ENST00000454802 394 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 CYCSP53-201ENST00000455540 265 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 RPL23AP64-201ENST00000469465 435 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 H3F3AP5-201ENST00000475267 429 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 SEC11B-201ENST00000518383 499 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 IGKV2-4-201ENST00000523070 340 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC084121.1-201ENST00000533882 835 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 TOMM20P1-201ENST00000534518 427 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL136520.1-202ENST00000555494 763 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 LINC01613-201ENST00000561476 2780 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC092718.4-201ENST00000566639 716 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL445647.2-201ENST00000615170 130 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC005393.1-201ENST00000617916 584 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL391262.2-201ENST00000622466 494 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AL138960.2-201ENST00000625145 535 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC137056.2-201ENST00000624055 1958 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 AC013488.1-201ENST00000526618 1838 ntBASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC33Q8N5R6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 RNA5SP431-201ENST00000410312 120 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL357078.2-201ENST00000416486 427 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 MRPS21P5-201ENST00000417885 231 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL360013.1-201ENST00000419031 858 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 PSMD10P2-201ENST00000432890 672 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 GAPDHP59-201ENST00000435908 267 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 RPL5P12-201ENST00000477071 851 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC117395.1-201ENST00000487390 403 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 MTND6P8-201ENST00000503471 522 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 SNORA58-201ENST00000505219 137 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC135983.3-201ENST00000528049 1226 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 NDUFA5P11-201ENST00000567995 343 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 AL356986.1-201ENST00000604085 341 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 RN7SL261P-201ENST00000613441 282 ntBASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC33Q8N5R6 MIR7854-201ENST00000620068 65 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms